rs32110491 SNP Detail

Summary

• ID
  rs32110491
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109765768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGCACTTC TGCATTTTTA
  GCATTTAAAT AGAAATGGCT CTCTGGTGGG TTTTCCCCTG CGTTAGTCAT GCAAATGCTC
  TATGCCTCAC TTACCACTCA GTTTCGGTGC CGGGATGGTT CTTTTGCACG CGTCCTGCTA
  AGACCCTTCC TCACCTCCTT GTATGGGAGT CCCTGGGGAA ACTTGAGTGC TGACTTCACC
  R
  TGCTGGGATT TTCCTCAGAG TACCTGGGGG ATTAAAAATG TGCCGTTTTT ATGGCACAGA
  AAAAGAGAGA ACACAGGTTG TTCTAGTCAT GAAGGAAAGG TACTGAATCC CGTTTATAAG
  TTTACCACGA GAACTTTGTT TCGTTTTTTA CTTTAAATTT TGTTTATTTT ATTATTTTAT
  TTATTTATTT ATTTATTTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47127661	NES11595161	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32110491					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47127661	NES11595161	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109765768 () rs orientation: forward

Symbol	Name	Function Class
Gm72506	predicted gene, 72506	within coordinates
Gm72511	predicted gene, 72511	1626 bp upstream
Rr1426	regulatory region 1426	40 bp downstream
Rr653201	regulatory region 653201	1637 bp distal
Rr653203	regulatory region 653203	1622 bp distal
Rr653204	regulatory region 653204	1566 bp distal
Rr653205	regulatory region 653205	1567 bp distal
Rr653206	regulatory region 653206	996 bp distal
Rr653207	regulatory region 653207	79 bp distal
Rr653208	regulatory region 653208	within coordinates
Tssr2367	transcription start site region 2367	1635 bp upstream
Tssr2368	transcription start site region 2368	302 bp upstream
Tssr74253	transcription start site region 74253	1686 bp upstream
Tssr74254	transcription start site region 74254	198 bp upstream