rs32101278 SNP Detail

Summary

• ID
  rs32101278
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138281984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCA CCCCCACCCA CTCCCACAAT
  Y
  CCCGAGACAA GGTCTCACTA TGTAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45607322	mCV23281973	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss147650102	ENSMUSSNP5949150	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss321374829	CHEV_4_138110588	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32101278					SNP	T	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138281984 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15154	CpG island 15154	104 bp proximal
Cpgi15155	CpG island 15155	799 bp proximal
Rr602963	regulatory region 602963	768 bp distal
Rr602964	regulatory region 602964	within coordinates
Rr602965	regulatory region 602965	385 bp proximal
Rr602966	regulatory region 602966	899 bp proximal