rs32095370 SNP Detail

Summary

• ID
  rs32095370
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152063789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAG CAGAGGAGTC ACGAATGGGT
  R
  AGAAGGCATG CCCTCGCTGG GCTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss45606910	mCV24830108	ABI	CRAMUS_MOUSE	f	SNP	A	A	G					G		G
ss46735641	NES10985399	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	A	G	G		G	G	G	G	G	G	G
ss148078637	ENSMUSSNP5028027	ENSEMBL	ENSEMBL_Sanger	f	SNP			G							G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32095370					SNP	A	A	G	G	A	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46735641	NES10985399	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152063789 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnajc11	DnaJ heat shock protein family (Hsp40) member C11			Intron
				mRNA-UTR
				Splice-Site
Rr605686	regulatory region 605686			1397 bp distal
Rr605687	regulatory region 605687			652 bp distal
Rr605688	regulatory region 605688			465 bp distal
Rr605689	regulatory region 605689			1041 bp proximal
Rr605690	regulatory region 605690			1413 bp proximal
Rr605691	regulatory region 605691			1501 bp proximal
Rr605692	regulatory region 605692			1934 bp proximal