rs32094184 SNP Detail

Summary

• ID
  rs32094184
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:117889137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCCCAGAA CTAAGCAGGT
  AAGAGGGCAA GCCTTCGAAG CGAGACCCCA GCTCGCACAG CTGTCTACCC AGAGCTACAG
  CATTTCCCCA TTCTACTTAC AGTTTAGAGT CCAGCTTCAG GAGGAAGCCC AGCCTATCAT
  ACTCTGAAAA GGAAAAGCAG AAAACGTCAC TGGAGTCACG CCATTGCTGC CACTGTGGCT
  K
  GCTTCCCCAG ATCTACACCA CGGAGACAGG CAGTGCTTGG AAAAGAACAC ACACTTCACA
  CGCTTCAAAG AACAGAAGCA AGCACATATG CCTTAACAAA TTTAAGTCAC AAAACAGCTA
  CTGAACATTT ATTTTGTATG AAGAGCCAGG TTCGGAAGCA GCTATTTCCC AGATCACCTA
  GGCCATCCAC TCCCATGTTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45606169	mCV23402240	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss147297475	ENSMUSSNP1516085	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss321281104	CHEV_4_117704545	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32094184					SNP	T	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117889137 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr598284	regulatory region 598284			1183 bp distal
Rr598285	regulatory region 598285			256 bp distal
Rr598286	regulatory region 598286			1337 bp proximal
St3gal3	ST3 beta-galactoside alpha-2,3-sialyltransferase 3			Intron
				Noncoding-Transcript-Variant