rs32092419 SNP Detail

Summary

• ID
  rs32092419
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:107999613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTATTTTTC CTTGTGACTT GGGACTTCCT CGGGACTCTT
  AGCTGGTATT TTTGGTATTT TCCAACAACG CCCTCCCCAC CCCCTTGAGT TGTGTTTTTT
  W
  CCTCTAAATA CCCCCTCACC CAACTACTCA GGATGCTAAG GACCTCTATC TCTGTGTGGT
  GTACAACTGT GGGCCTCAGA GTGCGCCCGG AATAAAAGT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45605950	mCV24671146	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
ss147185439	ENSMUSSNP6982271	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32092419					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107999613 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr597136	regulatory region 597136			946 bp proximal
Scp2	sterol carrier protein 2, liver			Intron
				Noncoding-Transcript-Variant