rs32084141 SNP Detail

Summary

• ID
  rs32084141
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:134904767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAC TAGCCTTCCT TATACCCAAA
  Y
  GCTGGTCGGT GGAAATAGAA AGTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45605730	mCV24993577	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss147540789	ENSMUSSNP6660993	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
ss321351076	CHEV_4_134733371	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32084141					SNP	T	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134904767 () rs orientation: forward

Symbol	Name	Function Class
Rr601942	regulatory region 601942	1473 bp proximal
Rr601943	regulatory region 601943	1680 bp proximal
Runx3	runt related transcription factor 3	mRNA-UTR
Tssr39605	transcription start site region 39605	1329 bp downstream