rs32081681 SNP Detail

Summary

• ID
  rs32081681
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:62052730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTAATGT GCACAGGTGT
  AAGAGTGAAT TCATGCCAAG TCACTGCCCA TCCCAGGGCA TAGCAATGAG ACGATGGACG
  AACAATAAAT CAGGTGCTGA CACGCCACGC TGATGTGTAT ATAAGCAGCA CCATTTTCCG
  GGGTTCGGGG TCTTCCTCCT GATGAAGCAA TAAAGCTTTG CTGTAGAAGA ATCCGGTTGT
  Y
  CGAGTGTGTT CTTGCTGGCA AGACATTAGC TCGGGACAAT TGGCCCAGAG AAACCAGGAA
  CGCCATACCA TCGCCGGTGC CGAGGGGACC CTCCGATTGC GGGGCGGATT CAGAACTACA
  GGACAAGGTA AGCTCTGTAA GGTAGGTTCG GTCTTGAACT TTCTCCACCG TTAGAGGCCT
  TTTTGTTTGT TTTCACGGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45605105	mCV24201946	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss146434327	ENSMUSSNP290847	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T		C
ss321142264	CHEV_4_61795527	CHEVERUD	SCREENING_POP	f	SNP						C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32081681					SNP	T	T	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:62052730 () rs orientation: forward

Symbol	Name	Function Class
Rr593247	regulatory region 593247	442 bp distal
Rr593248	regulatory region 593248	566 bp distal