rs32081674 SNP Detail

Summary

• ID
  rs32081674
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:108704601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATT TTTTTTTCCT TTTTTCCATA
  Y
  ATATATTGTT TTTTTGAACC TTGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45605095	mCV23912277	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss147191562	ENSMUSSNP505750	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32081674					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:108704601 () rs orientation: forward

Symbol	Name	Function Class
A730015C16Rik	RIKEN cDNA A730015C16 gene	within coordinates
Cpgi14566	CpG island 14566	340 bp proximal
Kti12	KTI12 homolog, chromatin associated	453 bp upstream
Rr398384	regulatory region 398384	265 bp upstream
Rr597229	regulatory region 597229	948 bp distal
Rr597230	regulatory region 597230	77 bp proximal
Tssr38317	transcription start site region 38317	423 bp upstream
Tssr38318	transcription start site region 38318	493 bp upstream
Tssr42741	transcription start site region 42741	952 bp downstream
Txndc12	thioredoxin domain containing 12 (endoplasmic reticulum)	Intron