rs32080773 SNP Detail

Summary

• ID
  rs32080773
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:75943246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAAACACAGT GTTCTTTTCA TCCAAATGTT TTAATAATAA AACCGGAGGG AGAATGAGAC
  TGAAGTTGCT GGCCTGTGAA AGATAATGGT GAGGTTTTGG ATCGAGCAAG AGACAATCTT
  CCTATCCAAC AGCGGGGAGA GCAACTGGTT CAAGGGCAGC TTGGGGTACA CAGTAATACC
  TTGTCTCAAA ACAAACAAAC AAACAAAGAA ACAAACAAAC AGGAATATAT AAAATATGTC
  AAACAAATTC AGTATTTACT TACAACTTCA TTGATTCATG TTCTTTCTCT CTTTCTTTCT
  Y
  TCTTTCTTTC TTTCTTTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  TCTTTCATTT GTTTGTTTGT TTGTTTGTTT TTCAAGACAG GGTTTCTCTG TATAGTCCTG
  GCTGTCTTGG AACTCACTCT GTAGACCAGG CTGGCCTCGA ACTCAGAAAT CCACCTGCCT
  CTGCCTCCCA AGTGCTGGGA TTAAAGGCGT GCGCCACCAC GCCCTGCCTA TGTTCTTTCT
  ACTAATAAAA ATTCCCTACT TTGGGGCTAG AGAGCAGCAT CAGTTGCTAA GAGTACTTGT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45604836	mCV24419782	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32080773					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:75943246 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ptprd	protein tyrosine phosphatase receptor type D			Intron
				Noncoding-Transcript-Variant
Rr594066	regulatory region 594066			348 bp distal
Rr594067	regulatory region 594067			650 bp proximal