rs32049874 SNP Detail

Summary

• ID
  rs32049874
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:97978845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTC AAGCAATAGC AGAAAAAGGT
  R
  CCATGTTCTA CCTTTGTGCC TGGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45601403	mCV24704428	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss147085116	ENSMUSSNP2587888	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss321219858	CHEV_4_97757299	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs32049874					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:97978845 () rs orientation: forward

Symbol	Name	Function Class
Nfia	nuclear factor I/A	Intron
Rr367651	regulatory region 367651	790 bp upstream
Rr595683	regulatory region 595683	216 bp distal
Rr595684	regulatory region 595684	624 bp proximal
Rr595685	regulatory region 595685	779 bp proximal