rs32047149 SNP Detail

Summary

• ID
  rs32047149
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:39693494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGTCCCTC AGGACCCAGC
  CACTGCTGAT CTGCTTCGAC TCCATGATAT ACTCAATGCC ACACCACCCC AGGTCCTTAC
  TGGCTTATTC CTAGAAAAGA GAAGCAACTT TAGTATCCCT CTGTGGCAGG CAGGATAAAC
  ATCGGTTATG TGTAGTGAGC TAAGAGGTAG CAGTCTCTAC TTGGAGATAC TAAGACAGGC
  K
  CAGCCTCTAT TTGCAACTCC AAAGAGAATT TGCTGTTTCA AGAGCACATC TCCCAGTTGC
  TTGGGCAACG AGACACTGAC TTGATTTGCA GTCGCTCCAT GAGATGCCAA CTCAGGATTT
  TCCTTGGTGC TTCATCACCA AGGAAAGGTC CTGTCACATG TTCTGTTCAG TCACTTGGCA
  CATCGAAATG ATATGGGAAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39356589	mCV23769459	ABI	CRAMUS_MOUSE	f	SNP	T	T	G				G		G
ss63483379	NES16999773	PERLEGEN	MM_PANEL2	f	SNP	T		G	G	G	G		T	G	G	G	T	G	G	T	G
ss147674896	ENSMUSSNP952353	ENSEMBL	ENSEMBL_Sanger	f	SNP			G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32047149					SNP	T	T	G	G	G	G	G	T	G	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63483379	NES16999773	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39693494 () rs orientation: forward

Symbol	Name	Function Class
Dpys	dihydropyrimidinase	Intron
Rr501538	regulatory region 501538	820 bp distal
Rr501539	regulatory region 501539	within coordinates