rs32038213 SNP Detail

Summary

• ID
  rs32038213
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154910106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTG GTCCGCAGAG CAACCTCTGA
  R
  TAGCAGACTA AGCAGTCCCA AGTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45599724	mCV24975290	ABI	CRAMUS_MOUSE	f	SNP		A					G		A
ss46772563	NES10999492	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A		G	A	A		G	G	G		A
ss148106747	ENSMUSSNP2615993	ENSEMBL	ENSEMBL_Sanger	f	SNP		A							A
ss321440021	CHEV_4_154199758	CHEVERUD	SCREENING_POP	f	SNP											G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32038213					SNP	A	A	A	A	A	A	G	G	A	A	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46772563	NES10999492	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154910106 () rs orientation: forward

Symbol	Name	Function Class
Rr606270	regulatory region 606270	within coordinates
Rr606271	regulatory region 606271	301 bp proximal
Rr606272	regulatory region 606272	398 bp proximal
Rr606273	regulatory region 606273	1491 bp proximal