rs32031378 SNP Detail

Summary

• ID
  rs32031378
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152082906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAGTGC CACACTATAC
  TAGCATGATA ATGCATACCT GTAAGCCCAG AGTCTGGGAG ATAGAGGGGA GAGAATCAGG
  ACTACTGGTC AACCTTGGTT CCCTAAGAAG CCTGAGGCCA GCCTGGTTGT CCCAAGACCC
  CATCTCAAGA TGCAGACACA AACCAAGAAG TAAATGACCA CACCTGATCT TTATTCCTTG
  K
  GCTAAAAATT TCACAGTAAA CAGCCAAGTC GTCCTCACAC TAAGAAACTG GCGGAAGGAC
  TGGGCTCAGG GGTTGAGAGT AAGCAGTAAG TTGCAGAGGA CTTGAGCTCA GACAACCCAC
  ACCGAGTGTA ACTCCAGCTG TAGGGAACCT GATGCCTCCA CTTTCCTCCA AAGGCAGCAC
  TTCATATACC CAAGGCCACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45599209	mCV22817356	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss148078752	ENSMUSSNP5276412	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32031378					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152082906 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15382	CpG island 15382	1290 bp distal
Gm69399	predicted gene, 69399	930 bp downstream
Rr398892	regulatory region 398892	1960 bp downstream
Rr605704	regulatory region 605704	1701 bp distal
Rr605705	regulatory region 605705	1706 bp distal