rs32030792 SNP Detail

Summary

• ID
  rs32030792
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148994830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAA GGAACTTCAG GAGCACTGCC
  K
  CACAGACTTT GGGCAGAATA TCCAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45599022	mCV22565432	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss148022790	ENSMUSSNP1218901	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss321423680	CHEV_4_148284482	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs32030792					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148994830 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	Intron
Rr377399	regulatory region 377399	1973 bp upstream
Rr604794	regulatory region 604794	904 bp distal