rs32025872 SNP Detail

Summary

• ID
  rs32025872
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154910032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAA CACAATCACC TTGGAACTCT
  R
  TTCTGATGGT GACAAATGTC AGGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
ss45598371	mCV24975114	ABI	CRAMUS_MOUSE	f	SNP		G					A		G
ss46772551	NES10999488	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G		A	G	G	G		A	G	A
ss148106737	ENSMUSSNP5087370	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							G
ss321440019	CHEV_4_154199684	CHEVERUD	SCREENING_POP	f	SNP												G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
rs32025872					SNP	G	G	G	G	G	G	A	A	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46772551	NES10999488	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154910032 () rs orientation: forward

Symbol	Name	Function Class
Rr606270	regulatory region 606270	72 bp proximal
Rr606271	regulatory region 606271	375 bp proximal
Rr606272	regulatory region 606272	472 bp proximal
Rr606273	regulatory region 606273	1565 bp proximal