rs32021572 SNP Detail

Summary

• ID
  rs32021572
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135665585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCATTTTT TTATTGCTGG
  GGATAGACCT CAGGGCCTAG GCATGCTCAG GCAAACATTC CACCACTGAA CTACAGCCTC
  AGCTCTTGTT TTTTAAGCTG AGTTCTCTAT GTAACTCAGG CTAATCTCAG CCTGTGGCTC
  TCCTGTGTTG TATTAAGTAT TTAATCTCAA TTGGGGGTTT CTACCCCACT TTTGATCATT
  Y
  AGTTCCCAGA TAAAAGACAG AAAACTTTCA TATTTATAAT AAGCCTTTAA TGCACTAGAG
  CTGGGCAGAT ATCTACCCTC TATGCTATTT TGTCTACTTT TCCATCAATA ACCCCCAAGG
  TATAACTTGC CATTTCCATC TGGTCAGCCC TCATGGCTAT GTTGTTGGTT TTTTTTTAAA
  TATTATTTAT TTATTTTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45598055	mCV22566165	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss147554389	ENSMUSSNP2944344	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs32021572					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135665585 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fuca1	fucosidase, alpha-L- 1, tissue			Intron
				Noncoding-Transcript-Variant
Rr602205	regulatory region 602205			841 bp proximal
Rr602206	regulatory region 602206			875 bp proximal