rs32020693 SNP Detail

Summary

• ID
  rs32020693
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148642535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCCCATGTC AGCCAGTTGA AGTCATCTGC TCCCTTGGAA
  CTGGAGTTAC AAGTGGTCAT GAACTTCAAG CCTGCGTGCT GTGGTCCTCT TTAAAAAAAA
  R
  CAGCGAGTGT TCTTAACTGC TTCAAAACCT CCCTTCCCTC CCTCGCCCAA TGTTTTAAAC
  AAATTGGAAA AACCCAATCC TAACGTGGTT TTGCACGTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45598045	mCV24946539	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32020693					SNP	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148642535 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15305	CpG island 15305	97 bp proximal
Exosc10	exosome component 10	351 bp upstream
Mtor	mechanistic target of rapamycin kinase	395 bp downstream
Rr398859	regulatory region 398859	144 bp upstream
Rr604703	regulatory region 604703	within coordinates
Tssr40280	transcription start site region 40280	344 bp upstream
Tssr40281	transcription start site region 40281	411 bp upstream
Tssr40282	transcription start site region 40282	657 bp upstream