rs32019633 SNP Detail

Summary

• ID
  rs32019633
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148968813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGGGAAGA ACCAGGGAAG
  GCGGGGTTCA AGTCTGGCCT GCTCACACGA TTTGGTTTGT TTGTCCTCCT TCTCCATCTC
  CCTTGTGCTT GGCATCTCTG ATCTCTGAGA AACAGGGCTG CAGAGACTGG ATTGCTTTTT
  TGGTGAGGCC AGATGGGGGT GTGGCCTCTC TGAGCATCTG GCTGCTGAGT GTCTCGGCCC
  Y
  ACCCGGGGCT CTTTGTCACA CAGGATGTCC CACACACCCA GGGTCCTGAG TGAAGACTGA
  GTTCATCCCC CTGCCCTGTA CCCTTAGCAC ACAGAACAAA CTTCTTGTTG ACTCCTCGGC
  CAGCTCCATC TGTCACCTTG ATCGCTGAGG CCCTTTAAAA GAAAGGGGAG CATGCCAGAC
  CACCAGCTCA GACCCCTCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45598297	mCV22998234	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss148022217	ENSMUSSNP2185252	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss321423549	CHEV_4_148258465	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32019633					SNP	T	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148968813 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	Intron
Rr604787	regulatory region 604787	1397 bp distal
Rr604788	regulatory region 604788	855 bp proximal