rs32012852 SNP Detail

Summary

• ID
  rs32012852
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148171285 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAC TGGAGAGGTG GAGGCAGGAG
  R
  ATCAGAAGTT TGTGGCAATC CTCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45597608	mCV24935119	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss321416957	CHEV_4_147460937	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs32012852					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148171285 () rs orientation: forward

Symbol	Name	Function Class
Agtrap	angiotensin II, type I receptor-associated protein	Intron
Cpgi15288	CpG island 15288	849 bp proximal
Rr377389	regulatory region 377389	888 bp downstream
Rr377390	regulatory region 377390	725 bp upstream
Rr604582	regulatory region 604582	470 bp distal
Rr604583	regulatory region 604583	162 bp proximal
Rr604584	regulatory region 604584	1193 bp proximal
Tssr40250	transcription start site region 40250	952 bp downstream
Tssr44579	transcription start site region 44579	1133 bp downstream
Tssr44580	transcription start site region 44580	1208 bp downstream
Tssr44581	transcription start site region 44581	1230 bp downstream