rs32012615 SNP Detail

Summary

• ID
  rs32012615
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:70296292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACGACAGAC CCAGGCTCTG CCATCATGAG AACAAAGCAA
  CTGGCAGTGT AACCCTGCGC CTGTCCTTAG ACGGCACAGC ACAGGGATAA GAAGCAGAGC
  R
  GTGACTGTCA GATTCGACAC TGTCAAGAAG GACCAAGGGG ATTCCATGAC ATGGGGACAG
  GAATGTCGAA ATTACTGAAA AACGTGAAAA ATGAGAAAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45596777	mCV24453521	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss146495399	ENSMUSSNP1147654	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs32012615					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:70296292 () rs orientation: forward

Symbol	Name	Function Class
Cdk5rap2	CDK5 regulatory subunit associated protein 2	Intron
Rr593865	regulatory region 593865	403 bp distal
Rr593866	regulatory region 593866	500 bp distal
Tssr37622	transcription start site region 37622	62 bp upstream
Tssr37623	transcription start site region 37623	87 bp upstream
Tssr37624	transcription start site region 37624	120 bp upstream
Tssr37625	transcription start site region 37625	164 bp upstream
Tssr42116	transcription start site region 42116	120 bp downstream
Tssr42117	transcription start site region 42117	152 bp downstream
Tssr42118	transcription start site region 42118	164 bp downstream