rs32011852 SNP Detail

Summary

• ID
  rs32011852
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152220063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGACGGA ATGGCCCTGG
  CTTTGACTCA GTTCCCCACA CTCCTCCTCC TCCTTCCATC CACTCACCTC GATTCGATCG
  CTGCCCCTTG CTGCTGGAGT GACTGGAGGA GCAGGAGTCA TAGTTGGAGA ACGTGCTAGT
  AGGCGAGCCC AGGTCAAAGG TCATTGGCTG GACCGACATG GTGGTGTTGG GCGAGGACAT
  R
  CCCGAGTCCA GCTGCTTTGC CTCCAGGTCC ATGGATTGAT CCCGGGACAA GACTCGGTGT
  TCCAAGCTCT GAGGGAAAAG GAGGGAAGTT TTGGGCTCCA GCGTCCTGTG GGGATAACTT
  CCAGGCCAGG CCTATCCAGA CTCCTATTCA GAGTCCTCCC TGAGCAACCA GCTGAGGCAC
  TTCCTGACTT CTGCACCATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45596684	mCV22782056	ABI	CRAMUS_MOUSE	f	SNP		G						A		A
ss46736661	NES10987544	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A		G	A	A	A	G	A	A	G	G
ss148079757	ENSMUSSNP1973723	ENSEMBL	ENSEMBL_Sanger	f	SNP		G								A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32011852					SNP	G	G	A	A	A	A	A	A	G	A	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46736661	NES10987544	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152220063 () rs orientation: forward

Symbol	Name	Function Class
Espn	espin	Coding-Synonymous
Gm69804	predicted gene, 69804	within coordinates
Rr605754	regulatory region 605754	510 bp proximal
Rr605755	regulatory region 605755	868 bp proximal
Rr605756	regulatory region 605756	1086 bp proximal