rs32009025 SNP Detail

Summary

• ID
  rs32009025
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135746766 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTTTTCAG TCAGTGACTT
  CCAAGAATGA AGCAACAACA AGCAGAGAGG ACTATGGATA TCCTCAAGTA GATGGAAACC
  AGCGCTGTCA ACCCAACGTA GCCCAGCAAA AACTGGTAGC AGATGACAGA AATAACAAAA
  GTTTACACAG TCCCATACAT AGGAATCTTG GGTTCTCCAC TTCCAGTCTT AGAGCTAACC
  R
  GTTCCCAGCA GTGACCCCCT CATTCTCCAC CTACCACCAA TCTATGGGCT TCATAGTTTT
  TACACTCAAA ACCTGATAAA GGACTGCTAA CTTTATCTGT CATGAAAATT GTTTCCAATC
  CAGTGATAGG AGCAAAAGCT AAGTCATCTC CCAGTAAGGT CTCTAACAAG TGAGCCTAGA
  GGCTAGATGA AGGCAGAGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45596930	mCV24785951	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147555984	ENSMUSSNP3484487	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32009025					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135746766 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15090	CpG island 15090	1491 bp proximal
Eloa	elongin A	Intron
Gm24362	predicted gene, 24362	969 bp upstream
Rr602239	regulatory region 602239	1136 bp proximal