rs31994706 SNP Detail

Summary

• ID
  rs31994706
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165917591 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCACAGCAGG TTGATGGCAG CTGGTATGGG ACAGAGCAGG
  GCCAGGACTA ATTATTACTC TGGTGACATC TGAAGCTTCT TTCCTGTCCC CTGTTTCCCC
  Y
  ACCCTGTACC CTGCATTGCC TTGAAAAGCG TAGCCACTTG TCAAGACTGG GTTCTATTGG
  AGTGTTAAAG CCACCCTGTG CCCTGGAGAG AGATGCTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45093480	mCV22723435	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss146012368	ENSMUSSNP2587806	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31994706					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165917591 () rs orientation: forward

Symbol	Name	Function Class
Rr422527	regulatory region 422527	1038 bp distal
Rr422528	regulatory region 422528	24 bp distal