rs31981859 SNP Detail

Summary

• ID
  rs31981859
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149927574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTCTGTCT AATTCTGATT
  CCAACGTTCT GGAAAAGACA CAACTGTGGA AACAGGAAAC AGATCCCGAG TGGCCTGGGG
  TTGGGATGCA GCCTCGGCTT ACACAATTTA TTGGTCACTG AAACTCCCTT GTAGGATACA
  ATGAAGCAGA AGTATACTTG TGGATTGTGA AACTCTGACA ATGAACCCTA ATGTGATATA
  Y
  ACACTTGGGG CAATAACAGT GCGGTCACGT GGTTTCATGG GCACGGGATG TCCCAGTGGG
  TTCAGGATGT TTATGGCCCA GGAGCTCATG TGCAGGGTGG GTAATCTCAA CTCCCTACTG
  TCTGCACATT TGACTGTGAC CCTGAAACTG CTCTAGATGG CAAGGCTAGT TGAGGGGGTC
  CTTCCCTAGG GTGCATGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45593690	mCV23446724	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss148041474	ENSMUSSNP6725279	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31981859					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149927574 () rs orientation: forward

Symbol	Name	Function Class
Rr605073	regulatory region 605073	1740 bp distal
Rr605074	regulatory region 605074	1867 bp distal
Rr605075	regulatory region 605075	917 bp distal
Rr605076	regulatory region 605076	1010 bp distal
Rr605077	regulatory region 605077	700 bp proximal
Rr605078	regulatory region 605078	1912 bp proximal