rs31974443 SNP Detail

Summary

• ID
  rs31974443
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148966057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTCC TGACACCGAT CCCGTCCCCT
  S
  GTGGCACCGC CCGGAGTAGA ACTCT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45592246	mCV22998035	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss148022137	ENSMUSSNP1499282	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss321423529	CHEV_4_148255709	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31974443					SNP	C	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148966057 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	Intron
Rr604785	regulatory region 604785	1955 bp distal
Rr604786	regulatory region 604786	within coordinates
Rr604787	regulatory region 604787	864 bp proximal