rs31969719 SNP Detail

Summary

• ID
  rs31969719
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:144634242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAG CAGCCTGAGA TCTTACAAAG
  Y
  CTCTCTCTTC TCAGATACCC AGACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45592294	mCV22759990	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss147840395	ENSMUSSNP5976322	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss321410743	CHEV_4_144497575	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31969719					SNP	T	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144634242 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dhrs3	dehydrogenase/reductase 3			Intron
				Noncoding-Transcript-Variant
Rr604256	regulatory region 604256			511 bp distal
Rr604257	regulatory region 604257			118 bp distal
Rr604258	regulatory region 604258			1149 bp proximal
Tssr40175	transcription start site region 40175			557 bp downstream