rs31967344 SNP Detail

Summary

• ID
  rs31967344
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148171737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTC CAAAGCACCT CTATCTTCCG
  S
  CCCTTTCCTC TCAGACACCA AAGGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45591341	mCV24935133	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss147991942	ENSMUSSNP4048923	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G	C
ss321416960	CHEV_4_147461389	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31967344					SNP	C	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148171737 () rs orientation: forward

Symbol	Name	Function Class
Agtrap	angiotensin II, type I receptor-associated protein	Intron
Cpgi15288	CpG island 15288	397 bp proximal
Rr377389	regulatory region 377389	1340 bp downstream
Rr377390	regulatory region 377390	273 bp upstream
Rr604582	regulatory region 604582	922 bp distal
Rr604583	regulatory region 604583	within coordinates
Rr604584	regulatory region 604584	741 bp proximal
Tssr40250	transcription start site region 40250	1404 bp downstream
Tssr44579	transcription start site region 44579	681 bp downstream
Tssr44580	transcription start site region 44580	756 bp downstream
Tssr44581	transcription start site region 44581	778 bp downstream
Tssr44582	transcription start site region 44582	1901 bp downstream
Tssr44583	transcription start site region 44583	1929 bp downstream