rs31967316 SNP Detail

Summary

• ID
  rs31967316
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153863247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAGTGCTGGG ATTAAAGGCT GCACGGCTGC CCAGCTTGTT TGTGTCTGAT TTCCTAGTCT
  TTTTCTTTCT ATGTACGCCA GGTTGGCCTT CACAGATCCT CCTGCCTCTG CTTTGCAGAG
  TGCTGGGAAT TAAAGGCGTG CACCACCATT CCTGGCTTGC CTTCCATTTC TTAACTGCTG
  GAATCACACA CCCAGTTTTA CATGGAACCA GGGCTTTGAG TGTGCTAGGC AAATAGTCTT
  CCAACTGAAT TACATCCCCA GCCTGATTAA GCTTCTTTCT TTTCTTCTTT TTTTTTTTTT
  W
  AAAAAAGGAA ATTACTTACT TTTATTTTAT GTGCATTGGT GTTATGATTG CATATTTATC
  TGTGTGAACA TGCGATATCT GCTGGACCTG GAGTTACAGA CAGTTGTGAG CGGCCATGTT
  GTGAGCTGGC TATTGATCCC CAGCCAGACC TTTGGAAGAG CAGCTAGTGA GTGCCATTAA
  CTGCTGAGCC AAAGGTTTCT CCCTTCCTTC CTTCCTTCCT TCCTTTTTTC TTTCTTTCTT
  TCTCTCCCTC CCTCCCTCCC TCCCTCCCTC TCTCTCTCTT TCTCTCTCTC TTTCTTTCTT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45091788	mCV23068586	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31967316					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153863247 () rs orientation: forward

Symbol	Name	Function Class
Rr420777	regulatory region 420777	557 bp distal
Rr420778	regulatory region 420778	848 bp proximal