rs31961168 SNP Detail

Summary

• ID
  rs31961168
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:118849592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTTGGAAT TTCGAGGACT TTGGGAGGGT GAAACCACCG
  TCCCAGCCCT CTGTGGACTA TTTCTGAGCA CCATCTAGGA AGAAAAAATG CTAACCCACC
  Y
  ACCTCTCTGT TGTTTTGCAT TCCTGTTACT TTCCCAGAGT TCATCTTAAC TGGTACAATC
  CAAGCCAAAC AGCCCTCAGC AACTGCAGGT TTGCACTTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45590908	mCV24567976	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss147321710	ENSMUSSNP1370702	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31961168					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118849592 () rs orientation: forward

Symbol	Name	Function Class
Gm12861	predicted gene 12861	within coordinates
Gm12865	predicted gene 12865	within coordinates
Rr598448	regulatory region 598448	274 bp distal
Rr598449	regulatory region 598449	392 bp distal
Rr598450	regulatory region 598450	168 bp distal