rs31943928 SNP Detail

Summary

• ID
  rs31943928
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:108038554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCCACACAT TCACACACTC AATGATCTGA TTCCTCAAAT
  TGGAGGGAAA AGAACATTAA AGGCGCCAGG GTGTGGCAGC TCATGCTGGA AGCCCCAGCA
  Y
  TGAAACAGCA GGATTGCTGA GCTCAAGGCC AGTCTCGGCC ACACATAACC TGGAGCAGCT
  GAGGAAATGG AACAAGACCA AGGTCTCCCT AAAGTTTCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45588728	mCV24670164	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147185965	ENSMUSSNP2948072	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31943928					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:108038554 () rs orientation: forward

Symbol	Name	Function Class
Rr597140	regulatory region 597140	657 bp distal
Zyg11a	zyg-11 family member A, cell cycle regulator	mRNA-UTR