rs31941768 SNP Detail

Summary

• ID
  rs31941768
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150270498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTAA GCGTGTAGAT AAGATGGCTC
  Y
  GTAGGTAAAG ATGCTTGTAA CCAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45588603	mCV24222031	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	C
ss321428589	CHEV_4_149560150	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31941768					SNP	C	C	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150270498 () rs orientation: forward

Symbol	Name	Function Class
Car6	carbonic anhydrase 6	974 bp downstream
Rr605217	regulatory region 605217	472 bp proximal
Rr605218	regulatory region 605218	679 bp proximal
Tssr40380	transcription start site region 40380	1375 bp upstream
Tssr40381	transcription start site region 40381	1384 bp upstream
Tssr40382	transcription start site region 40382	1402 bp upstream
Tssr40383	transcription start site region 40383	1416 bp upstream
Tssr44720	transcription start site region 44720	1349 bp downstream