rs31940134 SNP Detail

Summary

• ID
  rs31940134
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81822422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGAAGAGC AAGCCTTGAG
  ATGGCCAATG TGGTTTAAGC TAACTGCAAG GCCACTACTC CTAGCTTGAA TCACACTATT
  TCAAACCTCT GCTGTACATA TGTAAAGTGT AAAAATCTTC AAGACACTAT TTGATCATAG
  TAGCAAAAGT CTAACATACA TTGAATTAAA AGCTCTTAAC AAGACAAAAG TAGTTTAAAA
  W
  TTTTTTTTAA ATAACATTTG GACCAAAAAA GAAACCAAAA GAATGGTCAA AAATTGTTTC
  TATAAAACAA GTAGAACATT CATGTTTTTT ATAAAGGCAA GGCACAAAAT CCAAGTCCTT
  GTTAGCTCAA TATCTGCTTG TTATAAATAA CAAAGAGTAA AGTGGGTAGA ATATGTAAAT
  GCTTTTATAA GAGAAGGATC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46085758	mCV25417773	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss145171508	ENSMUSSNP4584671	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31940134					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81822422 () rs orientation: forward

Symbol	Name	Function Class
Gm45089	predicted gene 45089	within coordinates
Gm73333	predicted gene, 73333	within coordinates
Rr650249	regulatory region 650249	1632 bp proximal
Tssr67529	transcription start site region 67529	1124 bp upstream