rs31936769 SNP Detail

Summary

• ID
  rs31936769
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135152167 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTACCCAAG AGCAGAGACA
  GGCCCTGTAC ACAAATAAAA TGTGCTAACG AAACACATTC TGTATATTTA ATATCTTCAA
  GTAAAATATT TAAATAGCTT TTCTTCAATT CTAGTCTCCA AAACTCCATG AATAAGTGAA
  TGAATAAAAA CTGCATTCTT TTTTTTTTTT TTTTGACTTT TCAAGACAGG GTTTCTCTTT
  R
  TAGCCCTGGC TGTCCTGGAA CTCACTTTAT AGACCAGGCT GGCCTCAAAC TCAGAAATCC
  GCCTGCCTCT GCCTCCAGTA GTGCTGGGTG GGATTAAAGG CGTGTGCCAC CACTGCCCAG
  CAAAATGTGC ATTCTTAGCC AGGTATCGCC CTGACTCAGA GTTCACTAGT TCATTGTTCT
  TCCAGTGTGG TGGGAGGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45587675	mCV25168338	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss147546749	ENSMUSSNP3891737	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31936769					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135152167 () rs orientation: forward

Symbol	Name	Function Class
Gm69999	predicted gene, 69999	within coordinates
Rcan3	regulator of calcineurin 3	Intron
Rr367746	regulatory region 367746	1837 bp upstream
Rr602028	regulatory region 602028	666 bp proximal
Rr602029	regulatory region 602029	1895 bp proximal