rs31932520 SNP Detail

Summary

• ID
  rs31932520
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137749309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAAGCCT GTGTGTATTG
  GCTAGCATTG AGAAGGGTTG TGAACGAAGT CATCTTTCTG TAGTCTGTTG AAATCCTTTT
  TCTTCCAGCC CACATGCTCA CATGTAAAAG AATTTTAAAC AGTATAATTG AGTCATAACC
  CAAATAATAG AATTATAGCT TAATGGTGTA TTTGATTCAA CTTTACGGTA CTTAGTAATT
  Y
  GCCAGTAAAG ACTGCTAGAC TGTCAGGGAG ATGTCTGTCG CCTTGAGCAT CTCGAGGCTT
  TTAGCCACTT GCTTCCCTCC ACCCATCTCA TTCCTGTGAA GTTTCTCTTT TATTGCTGGT
  CTTCCTGATT TTTAAAAATG TAATATTCAG GCTGGAGAGA TGGCTCAGCA GTTAAGAGCA
  TCGACTGCTC TTCCAGAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45587458	mCV24053932	ABI	CRAMUS_MOUSE	f	SNP		T	C
ss147629449	ENSMUSSNP2478134	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31932520					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137749309 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Eif4g3	eukaryotic translation initiation factor 4 gamma, 3			Intron
				Noncoding-Transcript-Variant
Rr602820	regulatory region 602820			312 bp distal