rs31924838 SNP Detail

Summary

• ID
  rs31924838
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98693885 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCACTCCCAA GCGCCAGCAA AGGCAGGTCA GGCCTTTCCA
  TCAGAGAACA GATACCTGGC TTTGGGAGCT TTCCTTCAGC TGAATTAAAA GAAGGGGGGG
  K
  GGGTTTCCAG GGAAAACACC CTAGACAAAA TCTGATTCTG CTGTTAACGA ACTACTTGAG
  ATTTTTAAGT CTGTCCAACA CCAAAAGGAA GATTTTGTA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45586247	mCV24703746	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss147090488	ENSMUSSNP2363063	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31924838					SNP	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98693885 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kank4	KN motif and ankyrin repeat domains 4			Intron
				Noncoding-Transcript-Variant
Rr595791	regulatory region 595791			576 bp distal
Rr595792	regulatory region 595792			within coordinates