rs31913077 SNP Detail

Summary

• ID
  rs31913077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:8684385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGTTGACACA AAACTAGCCA GTACAGAGAC AGAGTCTAAA GTAGCCCAGG CTGGCCTCAA
  ACTCATTATG TAGTTAACAA TGGCAGAACT CCTGAAGCCC TAGCTTCCAC CTTCTGAGTG
  CTAGGATTAC AGGCATGAGC CACCACACAC AGTTTAAGCA GTGTGGAGCG TTGAACCCAG
  GGTTCCTTAT GCTAGGAAAG CACTCTGCCA AGTGCCCTAC ACATCCCAGC CCCATGGTTT
  TCTTGCTGTT TGCTTTTGTT TCTTTATTTT GTAGCATTGA AAATTGAACT GTGTGGTCTT
  Y
  TGCACGCTAG GCAAACATTC GACTACTGAA GTATACTCAT AGCCTTTTGG TGTTTTGAAA
  CAGGGTCCTG TTATATAGTC CAGGTTGGTT TTGAACTTAC AATGCTTTTG CCTCCATATC
  CTACAGAGTT ATGCGGTTAC ACTCAGCTAA AAAAAAAAAA AAAAAAAAAA AAAACCTCAC
  TGTGCTATAA ACCCTTTCTG ATCTGGCCTA CATTTTATTT CTATCTTCAC TTCCCTCCCT
  GTGTGTGCTG TACTCTAACT GAGCCAAATT ACTTGCGGTC CTGACACAGG CCATCTGCCT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45585089	mCV23779852	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs31913077					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:8684385 () rs orientation: forward

Symbol	Name	Function Class
Rr588556	regulatory region 588556	224 bp proximal
Rr588557	regulatory region 588557	776 bp proximal