rs31906226 SNP Detail

Summary

• ID
  rs31906226
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:17977180 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCC AAAAGAAGGA CACAGAGACC
  Y
  GGTGCTTTTA TTAACATGCT GCAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46081962	mCV25039046	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss148438423	ENSMUSSNP2982615	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss322114467	CHEV_7_18828604	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31906226					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:17977180 () rs orientation: forward

Symbol	Name	Function Class
Rr642879	regulatory region 642879	892 bp proximal
Tssr64734	transcription start site region 64734	1947 bp upstream
Tssr64735	transcription start site region 64735	1980 bp upstream