rs31905895 SNP Detail

Summary

• ID
  rs31905895
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:120525871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGC TCAGTCCTCA TTCCACAGAC
  R
  AGGGGTGTGG CGCCAGCCCA AGCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45584606	mCV24855321	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss147346040	ENSMUSSNP284135	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321286012	CHEV_4_120341279	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31905895					SNP	A	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:120525871 () rs orientation: forward

Symbol	Name	Function Class
Cited4	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	854 bp downstream
Cpgi14717	CpG island 14717	979 bp distal
Rr598841	regulatory region 598841	57 bp proximal
Rr598842	regulatory region 598842	877 bp proximal
Rr598843	regulatory region 598843	1773 bp proximal
Tssr38802	transcription start site region 38802	1731 bp downstream
Tssr38803	transcription start site region 38803	1502 bp downstream