rs31904744 SNP Detail

Summary

• ID
  rs31904744
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:17980510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTT TCAGAGTCCA AATCCTGAGA
  Y
  AATACAGAGA AGGCAATGAT TATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46081648	mCV24837709	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss148438476	ENSMUSSNP4530487	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			T
ss322114473	CHEV_7_18831934	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31904744					SNP	C	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:17980510 () rs orientation: forward

Symbol	Name	Function Class
Mill1	MHC I like leukocyte 1	Intron
Tssr64734	transcription start site region 64734	1369 bp downstream
Tssr64735	transcription start site region 64735	1349 bp downstream
Tssr64736	transcription start site region 64736	1183 bp downstream