rs31892155 SNP Detail

Summary

• ID
  rs31892155
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138667301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACTT TGAAGGCTGT ACCTTGCCCC
  Y
  GGCCCCTTCA TTTCTCTCTC TCTGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45582281	mCV24061213	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss147660970	ENSMUSSNP6642772	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss321378242	CHEV_4_138495905	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31892155					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138667301 () rs orientation: forward

Symbol	Name	Function Class
Gm33011	predicted gene, 33011	1382 bp upstream
Rr603049	regulatory region 603049	1941 bp distal
Rr603050	regulatory region 603050	867 bp distal
Rr603051	regulatory region 603051	1486 bp proximal
Rr603052	regulatory region 603052	1972 bp proximal
Tssr44194	transcription start site region 44194	1359 bp upstream