rs31890403 SNP Detail

Summary

• ID
  rs31890403
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150353625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCAT GTGTTTGCGT GCGACCGCGC
  R
  CACGCGGGCG AGAGTATACG TGTGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45582814	mCV24224139	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss148051590	ENSMUSSNP4850597	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss321428887	CHEV_4_149643277	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31890403					SNP	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150353625 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15349	CpG island 15349	within coordinates
Rr377418	regulatory region 377418	within coordinates
Rr605259	regulatory region 605259	1945 bp distal
Rr605260	regulatory region 605260	238 bp distal
Rr605261	regulatory region 605261	within coordinates