rs31888118 SNP Detail

Summary

• ID
  rs31888118
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140217268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGGCACACAC CTGAACCCCA GCACTTAAAA GGCTGAAGCT AGAGGATAGG GAATTTGAGG
  CTAGCCTGGA CTACATACTG AGACAAAAGT ATACTGGATG GATGGATGGA TGGATGGTTA
  GATAGATAGA TGATAGGTAT ATCGATACAT AGATATATAC TTAGACATAG ATAGATAGAT
  AGATAGATAG ATAGATAGAT AGATAGATAG ATAGATAGAT AGATAGATAG ATAGATGGAT
  GGATGGATGG ATGGATGGAT GGATGGATGG ATGGATGGAT GGATGGATGG ATGGATGGAT
  R
  GATAGATAGA TAGATAGATA GATAGATAGA TAGATAGATA GATAGATAGA TAGATAGATA
  GATAGGTAGA TACATACATA GATAGATACA TAGATACATA GATACATAGA TAGATAGATA
  GATAGATAGA TAGATAGATA GATAGATAGA TAGATAGATA CATAGATAGA TACATAGATA
  GATACATAGA TAGATACATA GATAGATACA TAGATAGATA CATAGATAGA TACATAGATA
  GATAGATAAT AGATAGATAC ATACATACAT ACATACATAC GTACATACAT ACATAGATAC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45582241	mCV23511239	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31888118					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140217268 () rs orientation: forward

Symbol	Name	Function Class
Rr603445	regulatory region 603445	1709 bp proximal