rs31881870 SNP Detail

Summary

• ID
  rs31881870
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148148825 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTT ACAGATGGCC AACCACAGAC
  Y
  GAGAGTACTT AAGTGGCTTG CTCAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45580382	mCV23437571	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss147991159	ENSMUSSNP2170688	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss321416782	CHEV_4_147438477	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31881870					SNP	T	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148148825 () rs orientation: forward

Symbol	Name	Function Class
Gm13201	predicted gene 13201	within coordinates
Gm66468	predicted gene, 66468	within coordinates
Rr604572	regulatory region 604572	1463 bp proximal
Rr604573	regulatory region 604573	1601 bp proximal
Rr604574	regulatory region 604574	1839 bp proximal