rs31879532 SNP Detail

Summary

• ID
  rs31879532
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137310896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATAA TATACTCACG CAATCCCCCC
  K
  CCCCCGACAC ATATACATAA TAAAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45580943	mCV24799620	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	G
ss147612456	ENSMUSSNP4064204	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss321365387	CHEV_4_137139500	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31879532					SNP	T	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137310896 () rs orientation: forward

Symbol	Name	Function Class
Gm70277	predicted gene, 70277	within coordinates
Ldlrad2	low density lipoprotein receptor class A domain containing 2	1481 bp upstream
Rr602653	regulatory region 602653	1579 bp distal
Rr602654	regulatory region 602654	1362 bp distal