rs31872691 SNP Detail

Summary

• ID
  rs31872691
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152070170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGAA CACCGTGGGC ACAGCATTGT
  R
  TTTCAGGTTC TTGCGGTTCC CAAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45580174	mCV24830061	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148078687	ENSMUSSNP2797432	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31872691					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152070170 () rs orientation: forward

Symbol	Name	Function Class
Rr605694	regulatory region 605694	1270 bp distal
Rr605695	regulatory region 605695	1237 bp distal
Rr605696	regulatory region 605696	162 bp proximal
Rr605697	regulatory region 605697	357 bp proximal
Rr605698	regulatory region 605698	1021 bp proximal
Thap3	THAP domain containing, apoptosis associated protein 3	Coding-NonSynonymous