rs31867337 SNP Detail

Summary

• ID
  rs31867337
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141231449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGGCCGGCCT CGAACTCATA GAAATCCATC CACCTGCCTC TGCCTCTTTG GTGCTGTTTA
  CCATGAACCA CCTTTTCTAA AAAACAAACA AACAAGAAAC TCCGGATGTC GCTCTGCAGC
  TCAGGCTTGA GTGAGAGCCT CCTTCCTTAG GCCCTTGAGT ACAACAACCC AGGTGCCAGC
  CACTATACCC AGCAAAAACG TAGGCTATTT CATTTCAAAC GAAATCCCAA CTGGGTACAC
  CTGAGGCAGC CTGTGTCAAT GCCTAAGCCA ATATACTTTG AGGTTTTGTC CTTCCCAAAT
  K
  TAACTTTACG CTAACTCTCC GTCCTGTCCA GGACACGAGA GAAGCCCGCT CGTGCCTACT
  TCGGAACATT CTTTGGAAGT CTCCCCGGGC CCAAGAGGTC TGAAAGGCAC TCAGCTACCC
  AGAGGCAGCT TAGCTTTACA ACTTGGGGAC ACTGGCTTAT TATTGAAAAA CCTCGGCCTA
  AAGCTGTTCC CTCTAAATGC GGCCATTTCT TTAGAATTTT CACCAAAGAC ACAAAGCCAT
  AATGCACAAT GGCTGTGGCA CTGTGACAGG GCACATTCAA AAGCAGCTGT CCCTGCGAGA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45579800	mCV22902682	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	G
ss147739607	ENSMUSSNP1130821	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31867337					SNP	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141231449 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr603780	regulatory region 603780			421 bp proximal
Rr603781	regulatory region 603781			1794 bp proximal
Spen	spen family transcription repressor			Intron
				Noncoding-Transcript-Variant