rs31865383 SNP Detail

Summary

• ID
  rs31865383
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135579860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCAAGCC TGGATACCTC
  AGTTTGTTCC CCAGAACCTA TGTAAAGATA GGAGAGTATG GATTGCCCAA AGTTGCCCTC
  TGACCTCCAT ATACTCACAC TGGCACACTC CCTTCAACCT ACTCTGCACA CCACTTGATA
  CTTACAAAAT CAAAGGTTTG TGTTTTAAAA GTCTCGAAGG GAGGGCTGGG CAGTGGTGGC
  R
  CACGCCTTTG ATCCCAGCAC TCCAGAGGCA GAGGCAGGCG GATCTCTGAG CTTGAAGCCA
  GCTTGGTCTA CAGAGTGAGT TCCAGGACAG CCAGGGATAC GCAGAGAGAA ACCCTGTCTC
  AGGGGGGAAA AAAAAAGTCT CATGGGGAAG CACACAATAG CAACAACCTG ACCATCAATA
  AATGGACCAA TAGCCGGGCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45579312	mCV24798542	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147552042	ENSMUSSNP1968149	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs31865383					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135579860 () rs orientation: forward

Symbol	Name	Function Class
Gm13000	predicted gene 13000	1129 bp upstream
Gm69173	predicted gene, 69173	within coordinates
Rr602158	regulatory region 602158	within coordinates
Rr602159	regulatory region 602159	1454 bp proximal