rs31862908 SNP Detail

Summary

• ID
  rs31862908
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:114354731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAAA ATTATTAGTC ATAAAGAGTA
  Y
  ACCTCACCAC TATCAGAAAG AGATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	MSM/Ms	SM/J
ss45579035	mCV23126491	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss147269878	ENSMUSSNP632127	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T			C
ss321274301	CHEV_4_114170139	CHEVERUD	SCREENING_POP	f	SNP					T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	MSM/Ms	SM/J
rs31862908					SNP	T	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:114354731 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr597585	regulatory region 597585			1168 bp distal
Rr597586	regulatory region 597586			312 bp proximal
Trabd2b	TraB domain containing 2B			Intron
				Noncoding-Transcript-Variant