rs31856208 SNP Detail

Summary

• ID
  rs31856208
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:52300586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTG AGAGTTTGGG CATATCCTAT
  Y
  CTGTCAAATT TTTCTCTGAC TCATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45578503	mCV23575284	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss146310760	ENSMUSSNP4872739	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss321116038	CHEV_4_52313458	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31856208					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:52300586 () rs orientation: forward

Symbol	Name	Function Class
Rr592143	regulatory region 592143	1084 bp distal
Rr592144	regulatory region 592144	1165 bp distal
Rr592145	regulatory region 592145	1163 bp proximal
Rr592146	regulatory region 592146	1247 bp proximal