rs31855598 SNP Detail

Summary

• ID
  rs31855598
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:171017950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATG GTTGTGAGCC ACCATGTGGT
  K
  GCTGGGAATT GAACTCAGGA TCTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45077165	mCV24421026	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
ss146156077	ENSMUSSNP602835	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31855598					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171017950 () rs orientation: forward

Symbol	Name	Function Class
Gm70111	predicted gene, 70111	within coordinates
Pcp4l1	Purkinje cell protein 4-like 1	Intron
Rr423235	regulatory region 423235	1745 bp distal
Rr423236	regulatory region 423236	710 bp distal
Rr423237	regulatory region 423237	296 bp distal
Rr423238	regulatory region 423238	35 bp distal